Top 5 Accounting Software for Small Businesses in Kenya

Top 5 Accounting Software for Small Businesses in Kenya

Running a small business in Kenya means keeping a close eye on cash flow, invoices and tax compliance. The right accounting software saves time, reduces mistakes and helps you focus on growth. Below we review five accounting tools that work well for Kenyan SMEs, highlighting strengths, local integrations (like M‑Pesa) and what to watch out for.

What to look for before you choose

  • Kenya tax & KRA support — VAT reporting and KRA return support help avoid surprises.
  • Ease of use — pick something intuitive if you or your staff aren’t accountants.
  • Mpesa & local payments — integration or easy export for mobile payments.
  • Cloud & mobile access — manage your books from phone or laptop.
  • Budget & scalability — check monthly costs and how the plan grows with you.

Top 5 accounting software (Kenya)

1. Uhasibu (Kenya‑focused)

Best for: Kenya‑based micro & small businesses that need local workflows.

Why choose Uhasibu? Uhasibu is built with East African SMEs in mind — it supports petty cash tracking, mobile monitoring and KRA‑friendly VAT reporting. Local pricing and support make onboarding easy for first‑time users.

Consider: If your business scales very fast you may later want more advanced modules or integrations.

2. Zoho Books

Best for: Cost‑sensitive businesses that want a cloud solution with Kenyan tax support.

Why choose Zoho Books? Offers invoicing, expense tracking and Kenya‑ready VAT/TIMS features. It has flexible plans and a free tier for very small operations.

Consider: Confirm Mpesa/payment gateways or use export/bank feeds for reconciliation.

3. Sage Business Cloud Accounting

Best for: SMEs that prefer a trusted global brand with local presence.

Why choose Sage? Good invoicing, cash‑flow tools and mobile access with Kenya offerings from Sage’s regional product pages.

Consider: Pricing can be higher for add‑ons such as inventory or payroll modules.

4. QuickBooks Online / QuickBooks

Best for: Businesses that want flexible deployment (cloud + desktop options).

Why choose QuickBooks? Widely used globally with strong accounting features for invoicing, reporting and payroll integrations where available.

Consider: Some Kenyan users report limited payment integrations — check whether payment/merchant features are supported for Kenya.

5. Xero

Best for: Tech‑savvy businesses that want automation and many third‑party integrations.

Why choose Xero? Excellent bank‑feeds, reconciliation and app integrations to automate bookkeeping tasks.

Consider: Confirm KRA/VAT workflows and local payment options; costs can add up with extra apps.

Comparison at a glance

SoftwareBest forStrengthsWatch out
UhasibuKenya‑only SMEsLocalised, Mpesa & KRA‑friendlyMay need upgrade when scaling
Zoho BooksSmall, budget‑aware businessesAffordable, cloud, Kenya supportPayment integrations vary
Sage Business CloudBusinesses wanting global brandReliable features, mobile accessExtra costs for add‑ons
QuickBooksFlexible deploymentsFeature rich, large ecosystemCheck Kenya payment support
XeroAutomation & integrationsGreat bank feeds & appsCosts climb with add‑ons

How to choose the right one for you

  1. List your needs: Users, inventory, bank feeds, Mpesa, invoicing frequency.
  2. Check budget: Look for monthly cost + add‑on fees.
  3. Try the free trials: Use your real data for a week to test workflows.
  4. Check integrations: Bank, POS, payment gateways or Mpesa exports matter.
  5. Support & training: Local onboarding saves time if you’re not an accountant.
Quick tip: Moving off spreadsheets early and using software that handles VAT/KRA reporting will save you time and keep you compliant. If you accept mobile payments, choose software that makes Mpesa reconciliation simple.
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